FMDV S fragment mutants (proximal) - SRA

SRX24738276: FMDV S fragment mutants (proximal)
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 266.3M bases, 170.4Mb downloads

Design: Total RNA extraction, Reverse transcription using random hexamers and two FMDV-specific primers, second strand synthesis, cDNA library preparation using Nextera XT DNA Sample Preparation Kit (Illumina), sequencing on MiSeq platform using MiSeq Reagent Kit v2 (300 cycles) chemistry (Illumina) and paired-end sequencing.

Submitted by: The Pirbright Institute

Study: The dual role of a highly structured RNA (the S fragment) in the replication of foot-and-mouth disease virus.

PRJNA1116147 • SRP510560 • All experiments • All runs

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Investigation of role of the highly structured RNA localised in the untranslated region (UTR), called S fragment, during replication of foot-and-mouth disease virus (FMDV) in cultured cells.

Sample: FMDV_O1K_P-48_passage4

SAMN41523754 • SRS21460323 • All experiments • All runs

Organism: Foot-and-mouth disease virus

Library:

Name: M02063:56:000000000-BMD37:1:1101

Instrument: Illumina MiSeq

Strategy: WGS

Source: VIRAL RNA

Selection: DNase

Layout: PAIRED

Runs: 1 run, 1.2M spots, 266.3M bases, 170.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR29218778	1,155,642	266.3M	170.4Mb	2024-06-05

ID:: 33057496

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